ConsenrichΒΆ
Consenrich estimates regulatory signals from multi-sample functional genomics datasets.
Input: Sequencing data (BAM files, fragments, etc.) from ATAC-seq, DNase-seq, ChIP-seq, CUT&RUN, and other functional genomics assays where multiple samples or replicates measure a shared regulatory signal but differ in local noise, artifacts, sequencing depth, assay quality, or biological heterogeneity.
Output: Consensus signal estimate tracks (bedGraph, bigWig), associated uncertainty tracks (bedGraph, bigWig), and optional consensus peak calls (narrowPeak, gappedPeak, BED).
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Contact |
Nolan [dot] Hamilton <at> unc [dot] edu |